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Syllabus for Introductory Biology I Autumn 2001

Course #: 34BIOL101901   Biology I   Jennifer Mansfield 
Meeting times: MW 7:00-8:15 p.m.   office hours: by appt. 
EDSR-CLR 250     email: jenbrian1@earthlink.net 
Course Description: 
3 ug. cr. A course for science majors studying the major processes, concepts, and theories of living organisms; the elements of chemistry important to biology; the structure and function of biological molecules; cellular theory, organelles, and processes; biological terms and their derivation; the application of these concepts to daily experiences. 

Prerequisites: 
High-school Biology or Biology 104, High-school Chemistry, High-school Algebra 

Course Objectives: 
1.  To learn about the structures and functions of the biochemicals, organelles, and cells found in living organisms. 
2.  To explore and further your understanding of cellular processes such as cell to cell transport and metabolism which relate to living organisms. 
3.  To further understand the process of science and be able to use the scientific method to analyze a problem, formulate a hypothesis, and develop a means of finding a solution. 
4.  To relate biological terms used in this class to their Latin and Greek derivation, thereby facilitating the prediction/understanding of unfamiliar words. 
5.  To explore current topics in biology and discuss current research as well as the ethical and/or social responsibility issues related to topics under discussion. 

Grades: 
Grades will be determined based on the total points from your 3 test scores (50 pt. each), three newsnotes (5 pt. each), water assignment (25 pt), scientific literature assignment (50 pt.), final exam (150 pt.) and various short assignments worth 5-15 points. Students who miss a test should make arrangements with the instructor to make up the test at the time of the final exam.  A 5% deduction will occur for make up tests.  Only one test may be made up late, and only accompanied by a valid excuse.   If more than one test is missed, subsequent tests will receive a “zero”.  Newsnotes and short assignments will not be accepted late.  A 5% deduction will be taken for each class day late for the other assignments. The percentage of points you earn will be used for your final grade (100-94% A, 93-90% A-, 89-87% B+, 86-84% B, 83-80% B-, 79-77% C+, 76-74% C, 73-70% C-, 69-67% D+, 66-64% D, 63-60% D-, 59-0% F). 
 
 
 

Withdrawal Policy:  Students who wish to withdraw from this course must complete an Add-Drop Form and will receive the grade of W.  Students withdrawing prior to and including November 16, 2001, will receive the grade of “W” and after that date will receive an “F”.  Please do not leave add/drop forms in my mailbox. 

Required text: 
Campbell, N.A., Reece, J.B., Mitchell, L.G. 1999. Biology, 5th ed. Benjamin/Cummings Publ. Co., Inc. Menlo Park, CA. 

Optional texts/resources: 
· The publisher of your textbook, has created a Web site to accompany the text. The address of this Web site is http://hegschool.aw.com/bc/bio/index.html 
· Copies of Jan Carter’s lecture notes for General Biology are available on-line. These may be found by following links from the main Clermont Biology Page at: http://biology.clc.uc.edu 
· Borror, Donald J. 1960. Dictionary of Root Words and Combining Forms. Mayfield Publ. Co. (available in the bookstore) 
· Marchuk, William N. 1992. A Life Science Lexicon. Wm. C. Brown Publishers, Dubuque, IA. (available in the bookstore) 
· Berkow, Robert, ed. 1992 The Merck Manual. 16th ed. Merck, Sharp & Dohme, Rahway, NJ. (just went out of print --Merck Manual, Home Ed. may also be used, and should be available in the bookstore) 
· The Merck Manual is also available online at: http://www.merck.com/!!qpRmU0yhYqpRmU2PGT/pubs/mmanual/ 
· Pechenik, Jan A. 1993. A Short Guide to Writing about Biology. 2nd ed. HarperCollins College Publ., New York. (available in the bookstore) 

Academic Misconduct  Students must adhere to all policies stated in the University of Cincinnati Student Code of Conduct.  Please understand these policies and their consequences. 
Cheating is any dishonesty or deception in fulfilling an academic requirement such as: 
1. Using unauthorized material during an examination such as tape cassettes, notes, tests. 
2. Obtaining assistance with or answers to examination questions from another person with or without that person’s knowledge. 
3. Furnishing answers to examination questions to another person 
4. Possessing, using, distributing or selling unauthorized copies of an examination… 
5. Representing as ones own an examination taken by another person. 
6. Taking, as one’s own an examination in place of another person. 
Plagiarism is defined as 
1. Submitting another’s published or unpublished work, in whole, in part, or in a paraphrase, as one’s own without fully and properly crediting the author with footnotes, citations or bibliographic reference. 
2. Submitting as one’s own, original work, materials that have been produced through unacknowledged collaboration without release in writing from collaborators. 

ADA Students with disabilities: The policy of the Clermont College requires students to self-identify and provide proper documentation to the Director of the Learning Center for appropriate academic assistance. 
 
Attendance Although not formally part of the grading process, regular attendance will contribute to your success in this class. 
 

Schedule 

Although test, paper and newsnote due dates will be as listed, the actual lecture topics covered may take more or less time than listed, and thus may vary from the schedule.  Please read the assigned pages prior to coming to class.  Reading a little bit each night will foster greater understanding and makes the material more manageable. 
 
 

Monday Wednesday
9/24  class intro; characteristics of life; history of biology; pp. 1-13 9/26  history of biology; process of science; pp. 13-21 
10/1  Atomic theory; pp. 22-36; newsnote due 10/3  water; acids, bases, pH; pp. 37-47 
10/8 discuss newsnotes; water assignment due 10/10  TEST 1 
10/15  carbon chemistry; pp. 48-57; (return tests) 10/17 carbohydrates; pp. 58-65
10/22  Lipids; pp. 65-68 10/24 amino acids and proteins; pp. 68-76;  newsnote due  10/29 TEST 2 10/31 nucleic acids; pp. 77-82 (return test) 
11/5  Origins of life; intro. to cells; pp. 100-129;  discuss newsnotes; 11/7  cells and organelles; pp. 100-129; part 1 of scientific literature assignment due 
11/12  NO CLASS 11/14  Transport in/out of cells; pp. 131-146  ; newsnote due 
11/19 TEST 3 11/21  Energy in cells- metabolism, ATP; enzymes pp. 83-99 (return test) 
11/26  fermentation, glycolysis, cellular respiration; pp. 147-167; scientific literature assignment due 11/28  cellular respiration; pp. 147-168; 
EXAM week of Dec. 3 The final exam will consist of 50 pt over the last section of material and 100 pt over the rest of the course. 
 
 
Biology 101   Water Assignment 
 

Water is essential to life on earth.  You will be studying some of the unique properties of water this quarter and how these properties contribute to the survival of living things.  This assignment asks the question, “What is the source of my drinking water?”  This question fits into a larger question about understanding your bioregion.  One definition of bioregion from Thomas Berry is as follows: 

A bioregion is an identifiable geographical area of interacting life-systems that is relatively self-sustaining in the ever renewing process of nature.  The full diversity of life functions is carried out, not as individuals or species, or even as organic beings, but as a community that includes the physical as well as the organic components of the region. 
 
 

Your assignment is to trace water from the precipitation that falls on your watershed to your drinking water supply and then to your tap.  Complete this assignment by drawing a map of the path of water.  Begin with a cloud/raindrop and then trace this drop of water until it reaches your faucet.  Label major rivers/watershed and/or water treatment plants. 

How will you find this information?  There are many sources that will help you in this search.  One place you can start is by looking at your water bill and calling those in charge of billing you.  They should be able to direct you to some resources.  For those of you in Clermont County, the Office of Environmental Quality will be able to assist you in this quest and their web page may be helpful.  You may be able to find all of your information on the world wide web.  Note: those of you in Milford have a different path of water than the rest of Clermont County. 

This assignment is worth 25 points and will be graded on how well you demonstrate your understanding of your watershed and the path that water takes from rainfall to your faucet. 

NOTE:  You MUST tell me the source of your information, providing enough detail for me to find this source on my own. 



 Scientific Literature Assignment Biology 101 

Biology is a very diverse field, yet scientists from all disciplines publish their research, results and data in similar ways.  A scientific journal contains articles that have been reviewed by other scientists prior to publication.  These articles contain the actual data from the experiments as well as conclusions.  In contrast, other articles about science (i.e. National Geographic or Scientific American) are often summaries of scientific work presented to the public (both scientists and non-scientists). 

As biology majors you should be familiar with the scientific literature available. 

Objectives: 
1.  To recognize major scientific journals in the field of biology. 
2.  To understand the parts of a scientific paper. 
3.  To read, understand and summarize a scientific article. 

Scientific Literature Assignment Part 1. 

Scan the different types of scientific journals published in the field of biology.  There are two ways for you to approach this.  First, you can visit the CHEM-BIO (chemistry-biology) library on Main Campus in Clifton.  There you will actually see many of the journals printed in this field. 

Second you can use the Clermont library computer to search and see the various kinds of journals.  UC students have access to electronic versions of many journals.  At the Clermont Library Computer Home Page, find and click on the link, “Electronic Journal Center.”  This will take you to the various journals available.  Next, find and click on the “Life Sciences” link and this will take you to various subtopics. 

What you must complete and turn in for part 1. 
a.  Find the names of TWO scientific journals used to publish information on the following fields of biology: 
Microbiology 
Ecology 
Plant Biology 
Cell Biology 
Fish Biology 
Environmental Biology 
Molecular Biology 

b.  Pick an area of biology of particular interest to you.  Find and either download a copy or make a photocopy of an article from a scientific journal that you find interesting.  You will be using this article for part 2 of the assignment.   Scan the article and make sure this is something you are willing to spend time reading, understanding and summarizing.  Note:  Sometimes articles such as book reviews, summaries or editorials are found in the journals.  You must choose a scientific paper for this assignment—one that has actual data included.  Look for sections labeled Introduction, Materials and Methods, Results, and Discussion within the paper. 

c.  Turn in both the list of journals by topic and the copy of the article you have chosen on November 7, 2001.  This portion of the assignment will be worth 20 points. 

Scientific Literature Assignment Part 2. 

The next portion of the assignment requires you to summarize the article you have selected.  This portion of the assignment must be typed, and written in paragraph form.  Include the following information: what was tested, why this is important to study, general methods followed, types of data collected and conclusions. 

Carefully read and re-read your article to understand the material.  Write several rough drafts that include your points and then focus on clear, correct language.  Pay attention to spelling, grammar, and paragraph structure.  Your final submission should not exceed 2 pages typed and double-spaced.  This portion of the assignment is due November 26 and will be worth 30 points. 
 
 
 

 
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BIOLOGY LAB I, Autumn 2001   Jennifer Mansfield 
Course #34BIOL 111-001 MW 2:00-3:50 pm Office Hours: By Appt. 
Course #34BIOL 111-002, MW 4:30-6:20 pm jenbrian1@earthlink.net 

 
Course Description:  2 undergraduate credits.  This science majors’ course illustrates the processes, principles, and concepts discussed in Biology I through investigative labs that emphasize examples from every day life, the scientific method, keeping a lab notebook, and collecting and analyzing data via computer.  Activities include accuracy and precision of data, equipment skills, sugar in foods, fermentation, sterile techniques, osmosis, enzymes and field hikes to study local organisms and environments.  Coreq:  Biology 101 (which has the Prereq: High School Biology or Biology 104, High School Chemistry, High School Algebra). 

Course Objectives:  This Majors’ course will illustrate the biological processes concepts, and theories discussed in Biology I with examples from everyday life.  The goals will be: 
1.  To explore and develop one’s understanding of these processes in everyday life. 
2.  As these processes are studied, to learn to think analytically about them—to be able to: 
a.  Analyze a problem and focus on a hypothesis to be tested. 
b.  Determine the best way of testing the hypothesis, including determination of appropriate procedure(s) to follow and meaningful data to be gathered. 
c.  Interpret data and draw conclusions based on these data. 
d.  Distill the investigation into a precise abstract. 
3.  To communicate in ways appropriate to the biological sciences about the processes studied and results obtained. 
4.  To become familiar with the use of computers to gather and analyze data. 
5.  To learn about the variety of living organisms in the world around us. 

METHODS OF REACHING THESE OBJECTIVES: 
1.  Each lab period, you will participate in the scheduled activity for that day; lab exercise, experiment, nature hike, and/or test.  Plan to spend the entire period each time.  Do not rush to finish early.  Take the time to observe closely, be thorough in your work and take good notes.  This will allow you to yield better data and allow you to absorb and learn the material, thereby improving your ability to perform well on tests. 
2.  You will prepare and maintain a laboratory notebook into which you will put all information and handouts as well as your own notes and analyses.  This notebook will be organized according to a specified format and will serve as a permanent record of what you did in this class. 
3.  You will prepare for class by reading and thinking about the handout(s) provided.  From this introduction you should have a basic understanding of the topic being investigated and the procedures to be followed when you arrive for class. 
4.  After you have completed the laboratory exercise, you are expected to spend time analyzing what you did and the significance of your results.  These written analyses will be included in your lab notebook in an acceptable format.  Also, for a number of labs, you will be required to write formal abstracts, which will be turned in on designated dates. 
5.  For a number of lab exercises, you will be expected to enter data into a Web page for computer analysis and distribution to all class members. 
6.  You will make a collection of local plants. 
More details of these assignments will be given in separate handouts. 

Grades:  Grades will be determined based on the total of the points from two quizzes (50 pts each), midterm (150 points), final (150 pts), notebook grades (150 pts each), plant collection (100 pts) and the points from any “pop” quizzes and abstracts.  The percentage of points you earn will be used for your final grade (100-94% A, 93-90% A-, 89-87% B+, 86-84% B, 83-80% B-, 79-77% C+, 76-74% C, 73-70% C-, 69-67% D+, 66-64% D, 63-60% D-, 59-0% F). 
Ten percent (10%0 of the total possible points will be deducted per lab period for late assignments.  Unannounced quizzes cannot be made up. 
Withdrawal Policy:  Students who wish to withdraw from this course must complete an Add-Drop Form and will receive the grade of W.  Students withdrawing prior to and including November 16, 2001, will receive the grade of “W” and after that date will receive an “F”.  Do not leave Add/Drop forms in my mailbox. 

Academic Misconduct Students must adhere to all policies stated in the University of Cincinnati Student Code of Conduct.  Please understand these policies and their consequences. 
Cheating is any dishonesty or deception in fulfilling an academic requirement such as: 
1. Using unauthorized material during an examination such as tape cassettes, notes, tests. 
2. Obtaining assistance with or answers to examination questions from another person with or without that person’s knowledge. 
3. Furnishing answers to examination questions to another person 
4. Possessing, using, distributing or selling unauthorized copies of an examination… 
5. Representing as ones own an examination taken by another person. 
6. Taking, as one’s own an examination in place of another person. 
Plagiarism is defined as 
1. Submitting another’s published or unpublished work, in whole, in part, or in a paraphrase, as one’s own without fully and properly crediting the author with footnotes, citations or bibliographic reference. 
2. Submitting as one’s own, original work, materials that have been produced through unacknowledged collaboration without release in writing from collaborators. 

ADA Students with disabilities: The policy of the Clermont College requires students to self-identify and provide proper documentation to the Director of the Learning Center, for appropriate academic assistance. 

Schedule:  Weather permitting, we will be spending time outdoors studying local flora and fauna.  The following schedule is subject to change depending on weather.  Tests and other due dates will be at the stated times.  Please wear/bring clothing suitable for hiking through brambles and/or mud and/or poison ivy.  Due to safety regulations, long pants and sturdy boots/shoes are mandatory for field hikes.  Inappropriately-dressed students will not be permitted to participate in lab activities and thus will not have the notes for any lab(s) missed.  Since some of the hikes may be strenuous, people with hypoglycemia, diabetes, and/or asthma should plan ahead and come prepared to deal with any possible reactions they might have. 
 
Mondays                                                                                         Wednesdays 
Sept. 24  Introduction: Notebooks; Gather Biometrics Data           Sept. 26  Hike; Biometrics data 
Oct. 1  Accuracy and Precision                                                     Oct. 3  Hike 
Oct. 8 pH Bring Substances to Test                                              Oct. 10 Quiz and Hike 
Oct. 15 Sugar in Soda Bring Soda                                                Oct 17 Spectrophotometer Use and Beer’s Law; 
Oct. 22 Lipids Bring Clean Jar; Abstract for Sugar/Soda due        Oct. 24 Midterm; 
Oct. 29 Hike and Return Midterm                                                Oct. 31 Microscope Use; Abstract for Beer’s Law Due; 
                                                                                                       Notebook due 
Nov. 5 Fermentation Root Beer and Bread-Making                      Nov. 7  Cells and Organelles 
Nov. 12 NO CLASS                                                                   Nov. 14 Quiz and Intro to Yeast Plates; 
                                                                                                      Make Agar and Pour Plates 
Nov. 19 Serial Dilution and Inoculate Yeast Plate                          Nov. 21 Count Yeast Colonies; Enzymes; Collection Due 
Nov. 26 Diffusion and Osmosis; Finish Enzyme Lab                      Nov. 28 Final Exam; Notebook Due 
Exam Week:  Abstract for Enzyme Lab Due; (Notebooks returned) 

Required Equipment: 
1.  A bound 10x7 7/8 inch composition notebook with graph ruling (available in bookstore).  All notes taken during lab go directly into the notebook. 
2.  A pen, such as “Tombo Roll Pen Jr.®” or Pilot Precise which writes in black, indelible ink. 
3.  Clear contact paper to mount handouts, specimens, etc. into notebook. 
 
 

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Syllabus for Introductory Biology II, Winter 2002
 Syllabus for Introductory Biology II, Winter 2002 

Course #: 34BIOL1029001  Biology II  Jennifer Mansfield 
Meeting times: MW 7:00-8:15   office hours: by appointment 
Room: EDSR-CLR  250    Email: jenbrian1@earthlink.net 

Course Description: 
3 ug. cr.  A course for science majors studying cellular processes such as photosynthesis, mitosis and meiosis; basic genetics, introduction to taxonomy and survey of viruses, bacteria, protista and fungi; the application of these concepts to daily experiences. 

Prerequisites: 
High-school biology or Biology 104, High-school chemistry, High-school algebra and completion of Biology 101. 

Course objectives: 
· To learn about the processes of photosynthesis, mitosis and meiosis. 
· To learn the principles of genetics and their ramifications. 
· To learn the elements of replication, transcription and translation. 
· To understand basic taxonomy and begin a survey of the Kingdoms including Monera, Protista and Fungi. 

Required texts: 
Campbell, N.A., Reece, J.B., Mitchell, L.G. 1999. Biology 5th ed. Benjamin/Cummings Publ. Co., Inc. Menlo Park CA. (available at the bookstore) 

Watson, James D.  1968. The Double Helix.  Mentor Books, New York.  (later publication dates okay) .  This book may be borrowed from the Hamilton County Library System, the Clermont County Library System, or purchased from area bookstores or online for about $7.00. 

Grades: 
This class will be a self-directed study in which students will prepare assignments given throughout the quarter.  Grades will be determined based on total points received from assignments, projects, class discussions and a final exam.  Approximately 575 points will be assigned this quarter.  Assignments are due throughout the quarter and late assignments will be accepted only one day late with a 20% deduction.  The percentage of points you earn will be used for your final grade (100-94% A, 93-90% A-, 89-87% B+, 86-84% B, 83-80% B-, 79-77% C+, 76-74% C, 73-70% C-, 69-67% D+, 66-64% D, 63-60% D-, 59-0% F). 

 
Class Format: 
Each topic will be discussed in class and you will be given study guide questions to answer.  The questions will cover class material as well as material from the book.  These questions will form the basis for the final exam.  In addition you will have several assignments to complete throughout the quarter.  Each assignment will be described in a separate handout. 
 

Schedule 
Monday Wednesday 
Jan. 7  Introduction; Photosynthesis Jan. 9. 
Jan. 14  cell cycle/mitosis/meiosis; Mitosis project due (75 pt) Jan. 16 
Jan. 21. No Class Jan. 23 
Jan. 28  genetics Jan. 30 
Feb. 4   genetics; DNA structure and replicationGenetics Problems due (75 pt) Feb. 6 
Feb. 11  transcription/translation; Protein Synthesis Activity in Class (25 pt)  Feb. 13 
Feb. 18 taxonomy/phylogeny; Double Helix Due (100 pt) Feb. 20 
Feb. 25  Monera;Monera due (75 pt)  Feb. 27 
Mar. 4 Protista/Fungi; Fungi due (75 pt) Mar. 6 
Mar. 11  Final Exam (150 pt) 

 

Academic Misconduct  Students must adhere to all policies stated in the University of Cincinnati Student Code of Conduct.  Please understand these policies and their consequences. 
Cheating is any dishonesty or deception in fulfilling an academic requirement such as: 
1. Using unauthorized material during an examination such as tape cassettes, notes, tests. 
2. Obtaining assistance with or answers to examination questions from another person with or without that person’s knowledge. 
3. Furnishing answers to examination  questions to another person 
4. Possessing, using, distributing or selling unauthorized copies of an examination… 
5. Representing as ones own an examination taken by another person. 
6. Taking as one’s own an examination in place of another person. 
Plagiarism is defined as 
1. Submitting another’s published or unpublished work, in whole, in part, or in a paraphrase, as one’s own without fully and properly crediting the author with footnotes, citations or bibliographic reference. 
2. Submitting as one’s own, original work, materials that have been produced through unacknowledged collaboration without release in writing from caollaborators. 

ADA Students with disabilities: The policy of the Clermont College requires students to self-identify and provide proper documentation to the Director of the Learning Center, Rm. 22, for appropriate academic assistance. 
 

Withdrawal Policy:  Students who wish to withdraw from this course must complete an Add-Drop Form and will receive the grade of W.  Students withdrawing prior to and including March 1, 2002, will receive the grade of “W” and after that date will receive an “F”. 

 

 

 
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